AMBER Archive (2009)

Subject: [AMBER] ambertools and Snow Leopard 64 bits kernel

From: Alan (alanwilter_at_gmail.com)
Date: Tue Sep 22 2009 - 08:55:25 CDT

Hi there,

I would like to know if there's other already using (or trying to use)
AmberTools with Snow Leopard in 64 bits kernel.

I did a try and although I had a nice compilation (gcc/gfortran with
-m64), running tests failed for:

nab, antechamber (some cases)

For example:

make -f Makefile_at test.nab
( cd nab; make test )
=====================================================
Running test to make dna duplex:

/bin/sh: line 1: 21844 Segmentation fault ./duplex < duplex.in
make[1]: *** [duplex_test] Error 139
make: *** [test.nab] Error 2

make -f Makefile_at test.antechamber
cd antechamber/top2mol2 && ./Run.top2mol2
diffing sustiva.mol2.save with sustiva.mol2
PASSED
==============================================================
[snip]
==============================================================
diffing fluorescein_f2.mol2.save with fluorescein_f2.mol2
possible FAILURE: check fluorescein_f2.mol2.dif
==============================================================
cd antechamber/c60 && ./Run.c60
Abort
  ./Run.c60: Program error
make: *** [test.antechamber] Error 1

Many thanks in advance,

Alan

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