AMBER Archive (2009)

Subject: Re: [AMBER] antechamber error

From: Taufik Al-Sarraj (taufik.alsarraj_at_utoronto.ca)
Date: Wed Sep 16 2009 - 14:11:26 CDT

Hi,
Please ignore the this question. antechamber works fine now

thank you,
Taufik

Taufik Al-Sarraj wrote:
>
> Hi Dr. Case,
> I was just doing that, but after
> > ./configure_at
> > make -f Makefile_at
> > make -f Makefile_at test
> gives
> make -f Makefile_at test
> ( cd nab; make test )
> make[1]: Entering directory `/usr/local/Programs/amber10.25/test/nab'
> =====================================================
> Running test to make dna duplex:
>
> Can't open residue library
> /usr/local/Programs/amber10.09/dat/reslib/../leap/lib/all_nucleic94.lib.
> make[1]: *** [duplex_test] Error 1
> make[1]: Leaving directory `/usr/local/Programs/amber10.25/test/nab'
> make: *** [test.nab] Error 2
>
> i also ran make clean before ./configure.
> i am using fedora, is there something else that i am missing? btw,
> xleap works fine
>
> Thank you,
> Taufik
>
>
> case wrote:
>> On Wed, Sep 16, 2009, Taufik Al-Sarraj wrote:
>>
>>
>>> i recently updated AMBER and i changed the directory's name from
>>> AMBER10.09 to AMBER10.25
>>>
>>
>> If you changed the directory name after you compiled the program, you
>> will
>> need to recompile -- it only takes a minute or so. The locations of
>> data files are entered into the program at compile time.
>>
>> [For better or worse, this will change with the next release.]
>>
>> ...dac
>>
>>
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>
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