AMBER Archive (2009)

Subject: Re: [AMBER] ATP/GTP parameters

From: E.M. (pckboy_at_gmail.com)
Date: Mon Aug 31 2009 - 23:48:39 CDT

Greetings Francois.

I was wondering if you can send me all those nice parameters you have
for phosphates...also, could you give me some feedback as to what
software to use to visualize the MEP?
The swiss-pdb viewer for example calculates the MEP but this is based on
the atomic charges, and I would like to use the mesh
generated by gamess-UK/gaussian to visualize the MEP....

Regards

Eduardo

 
>
> If you are interested I can send you ATP, GTP force field libraries or
> any co-factors you might be interested in deriving from XYP (X = A, C,
> T, G, dA, dC, dT, dG. Y = M D T Q etc... An even more...).
>
>
> regards, Francois
>
>
>
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