AMBER Archive (2009)

Subject: [AMBER] Amber99SB

From: eric johnson (eric_m_johnson_at_hotmail.com)
Date: Tue Aug 11 2009 - 09:33:34 CDT

Several force fields, including Amber99SB, were used to calculate NMR scalar couplings in the following study:
Best, R.B. et al. 2008. Are current molecular dynamics force fields too helical? Biophys. J. 95:L7-L9.
A correction was later reported that indicates that Amber99SB was not implemented correctly in this study.
Best, R.B. et al. 2008. Biophys. J. 95:4494.
I use the Amber99SB force field and want to avoid any likely missteps. Is there a common pitfall?
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