AMBER Archive (2009)

Subject: [AMBER] query

From: bharat lakhani (lakhbharat_at_gmail.com)
Date: Fri Aug 07 2009 - 04:11:42 CDT

Hi,
Is there any option of increasing force constant in various energy term to
put constraint on any perticular energy term like bond or dihedral energy
during energy minimization. I want to fix internal parameters for perticular
part of protein so that it won't loose its proper structure but move from
one place to another to get minimum state energy.

                      If
there is any option please discuss also the science behind it.

Bharat
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