AMBER Archive (2009)

Subject: RE: [AMBER] ptraj - cluster

From: Wei Huang (whuang_at_cct.lsu.edu)
Date: Fri Jul 17 2009 - 07:34:00 CDT

Hi Aydin,

Is the "2drms" what you need?

Cheers,
Wei

-----Original Message-----
From: amber-bounces_at_ambermd.org [mailto:amber-bounces_at_ambermd.org] On Behalf
Of Cihan Aydin
Sent: Thursday, July 16, 2009 12:55 AM
To: AMBER Mailing List
Subject: [AMBER] ptraj - cluster

Greetings,

I have a small question. Is it possible to just get the RMSD matrix for
all frames and just quit without going through the clustering?

Thanks, 

-- 
Cihan Aydin
UMass Graduate School of Biomedical Sciences
PhD Student @ Schiffer Lab

364 Plantation St. LRB 970M
Worcester, MA 01605

cihan.aydin_at_umassmed.edu
+1 (508) 856-3430

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