AMBER Archive (2009)

Subject: RE: [AMBER] Problem with amber9 installation

From: Ross Walker (ross_at_rosswalker.co.uk)
Date: Mon Jul 13 2009 - 22:34:54 CDT

Hi Moitrayee

Did you do a make clean before the make? This looks to me like there was an
old version of libdivcon.a there that has been built with an older compiler.
Also do you have MKL_HOME defined / MKL installed?

All the best
Ross

> -----Original Message-----
> From: amber-bounces_at_ambermd.org [mailto:amber-bounces_at_ambermd.org] On
> Behalf Of moitrayee_at_mbu.iisc.ernet.in
> Sent: Monday, July 13, 2009 1:31 PM
> To: amber_at_ambermd.org
> Subject: [AMBER] Problem with amber9 installation
>
> Dear Amber Users,
>
> I am trying to install amber9 on a machine which has amber8 installed
> already.
> During make, I am getting a series of errors, the last few lines are as
> below:
>
> ../dcqtp/src/qmmm/libdivcon.a(diislb.o): In function `diislb_':
> ../obj/diislb.f:(.text+0x1fd9): undefined reference to `ddot_'
> ../obj/diislb.f:(.text+0x2039): undefined reference to `daxpy_'
> ../obj/diislb.f:(.text+0x2450): undefined reference to `ddot_'
> ../obj/diislb.f:(.text+0x3881): undefined reference to `ddot_'
> ../obj/diislb.f:(.text+0x38de): undefined reference to `daxpy_'
> ../dcqtp/src/qmmm/libdivcon.a(prjfc.o): In function `prjfc_':
> ../obj/prjfc.f:(.text+0x37b): undefined reference to `ddot_'
> ../dcqtp/src/qmmm/libdivcon.a(math.o): In function `dgefa_':
> ../obj/math.f:(.text+0xb7): undefined reference to `idamax_'
> ../obj/math.f:(.text+0x159): undefined reference to `dscal_'
> ../obj/math.f:(.text+0x22b): undefined reference to `daxpy_'
> ../dcqtp/src/qmmm/libdivcon.a(math.o): In function `dgedi_':
> ../obj/math.f:(.text+0x4b9): undefined reference to `dscal_'
> ../obj/math.f:(.text+0x550): undefined reference to `daxpy_'
> ../obj/math.f:(.text+0x942): undefined reference to `daxpy_'
> ../obj/math.f:(.text+0x99d): undefined reference to `dswap_'
> make[1]: *** [sander] Error 1
> make[1]: Leaving directory `/soft/amber9/src/sander'
> make: *** [serial] Error 2
>
> I am installing it serially on a fedora linux machine having 4GB ram
> and core
> two duo processor. I am using ifort to configure.
> Any help would be of great benefit to me.
>
> Thanks in advance.
> Best Regards,
> Moitrayee
>
>
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