AMBER Archive (2009)

Subject: [AMBER] default integration scheme in 7 vs. 10

From: Paul Brandt (brandt.j_at_gene.com)
Date: Wed Jul 01 2009 - 15:48:46 CDT

Hello,

 

I know this question is asked often, but I'd like to confirm what I've read
in the amber mail archives. Which integration scheme is used by Sander in
Amber 7 and by PMEMD in Amber 10?

 

If I read correctly in the archive, in 7, leap frog integration was
employed, and in Sander and PMEMD in 10, velocity Verlet is used. Is this
right?

 

Thanks,

 

Paul

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