AMBER Archive (2009)

Subject: RE: [AMBER] PMEMD compilation

From: Ross Walker (ross_at_rosswalker.co.uk)
Date: Sat Jun 20 2009 - 23:32:18 CDT

Hi Manoj,

Sorry, I mean cd to the test directory, not the src one.

Note if you built the parallel version then you need to set do parallel
first to the command required by your MPI installation. E.g.

export DO_PARALLEL='mpirun -np 2'

cd $AMBERHOME/test/
make test.pmemd

All the best
Ross

> -----Original Message-----
> From: amber-bounces_at_ambermd.org [mailto:amber-bounces_at_ambermd.org] On
> Behalf Of manoj singh
> Sent: Saturday, June 20, 2009 9:22 PM
> To: AMBER Mailing List
> Subject: Re: [AMBER] PMEMD compilation
>
> Dear Prof. Ross,
> I tried "make test.pmemd", and it is giving
>
> make: *** No rule to make target `test.pmemd'. Stop.
>
> --
> Manoj
> On Sun, Jun 21, 2009 at 12:15 AM, Ross Walker <ross_at_rosswalker.co.uk>
> wrote:
>
> > Hi Manoj,
> >
> > > Thanks for the reply.I have never got any error. Since there is not
> any
> > > test
> > > to make, I just wanted to make sure.
> >
> > Just make sure you run the test cases in the test directory.
> >
> > cd $AMBERHOME/src/pmemd/
> > make test.pmemd
> >
> > All the best
> > Ross
> >
> > /\
> > \/
> > |\oss Walker
> >
> > | Assistant Research Professor |
> > | San Diego Supercomputer Center |
> > | Tel: +1 858 822 0854 | EMail:- ross_at_rosswalker.co.uk |
> > | http://www.rosswalker.co.uk | PGP Key available on request |
> >
> > Note: Electronic Mail is not secure, has no guarantee of delivery,
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> >
> >
> >
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> >
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