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AMBER Archive (2009)Subject: Re: [AMBER] compiling amber10 with mac intel, ifort/icc and mpi
From: Alan (alanwilter_at_gmail.com)
Thanks David.
make clean
./configure_amber -nosanderidc -mpi -p4 gfortran
make -e AMBERBUILDFLAGS="-I/sw/include" -j 2 parallel
I got:
[snip]
Undefined symbols:
"_mpi_reduce_", referenced from:
___decomp_MOD_collect_dec in decomp.o
___ncsu_sander_hooks_MOD_rem_preinit in ncsu-sander-hooks.o
[long snip]
___ncsu_sander_hooks_MOD_rem_preinit in ncsu-sander-hooks.o
"_mpi_isend_", referenced from:
_zx_xy_transpose_ in ew_fft.o
_xy_zx_transpose_ in ew_fft.o
___fft_MOD_transpose in spatial_fft.o
___fft_MOD_ftranspose in spatial_fft.o
ld: symbol(s) not found
collect2: ld returned 1 exit status
make[1]: *** [sander.MPI] Error 1
make: *** [parallel] Error 2
I was hoping that someone here in the list would have done it for mac intel
Cheers,
On Wed, Jun 10, 2009 at 16:34, David A. Case <case_at_biomaps.rutgers.edu>wrote:
> On Wed, Jun 10, 2009, Alan wrote:
-- Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate Department of Biochemistry, University of Cambridge. 80 Tennis Court Road, Cambridge CB2 1GA, UK. >>http://www.bio.cam.ac.uk/~awd28<< _______________________________________________ AMBER mailing list AMBER_at_ambermd.org http://lists.ambermd.org/mailman/listinfo/amber
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