AMBER Archive (2009)

Subject: [AMBER] problem with creation of prmtop and prmcrd files

From: moitrayee_at_mbu.iisc.ernet.in
Date: Mon Jun 08 2009 - 08:00:18 CDT

Dear Amber Users,

I am trying to generate the topology and coordinate files for a protein
complexed with trna and ligand. I am getting the following error as attached in
the file: error_file. I am also attaching the original pdb file.
Please suggest me with a solution.

Thanks and Regards,
Moitrayee Bhattacharyya
Molecular Biophysics Unit
Indian Institute of Science
Bangalore - 560 012
India



  • application/octet-stream attachment: prot.pdb

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