AMBER Archive (2009)

Subject: [AMBER] What is the parallel efficiency of amber10

From: Catein Catherine (askamber23_at_hotmail.com)
Date: Sun Jun 07 2009 - 22:19:37 CDT

Dear Sir/Madam,

 

Could you mind to share your experience with me about the parallel efficiency of amber10. It seems to me that we can run AMBER10 efficiently in 8 processors on the same node.

 

However, the jobs may have problem to run on 2 nodes with 8 processors each.

 

Is it better to do the sander within the same node? Could you pls kindly share your experiences with me?

 

Best regards,

 

Cat

_________________________________________________________________
More than messages–check out the rest of the Windows Live™.
http://www.microsoft.com/windows/windowslive/_______________________________________________
AMBER mailing list
AMBER_at_ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber