AMBER Archive (2009)

Subject: [AMBER] xleap segmentation fault

From: Jayalakshmi Sridhar (jsridhar_at_xula.edu)
Date: Thu May 28 2009 - 11:29:47 CDT

Hi,
I had posted this message 3 weeks back, but did not get any reply. I am re posting it. I would appreciate any help received to resolve this problem in amber installation. Thr number between line9 and segmentation fault keeps changing everytime I try.Thanks for the help.

I have installed Ambertools1.2 and Amber10 in my linux redhat system. The test run went well. But when I try to start xleap by entering ./xleap from the $AMBERHOME/exe directory, I get the the following output:

Warning: Color name "Tan" is not defined
Warning: Color name "White" is not defined
-I: Adding /home/jsridhar/amber10/dat/leap/prep to search path.
-I: Adding /home/jsridhar/amber10/dat/leap/lib to search path.
-I: Adding /home/jsridhar/amber10/dat/leap/parm to search path.
-I: Adding /home/jsridhar/amber10/dat/leap/cmd to search path.
Warning: Color name "Black" is not defined
Warning: Color name "red" is not defined
Warning: Color name "yellow" is not defined
./xleap: line 9: 3550 Segmentation fault /home/jsridhar/amber10/bin/xaLeap -I/home/jsridhar/amber10/dat/leap/prep -I/home/jsridhar/amber10/dat/leap/lib -I/home/jsridhar/amber10/dat/leap/parm -I/home/jsridhar/amber10/dat/leap/cmd



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