AMBER Archive (2009)

Subject: [AMBER] Modifying a water molecule

From: Jorgen Simonsen (jorgen589_at_gmail.com)
Date: Sat May 09 2009 - 08:16:54 CDT

Hi all,

I have a molecule where I would like to modify its charge and its
interaction with a sodium ion - I have changed the charge of it following
tutorial 4 and added the interaction between ion and oxygen but how to model
the hydrogen hydrogen interaction?

Any hints or help appreciated thanks in advance

Best
J
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