AMBER Archive (2009)

Subject: Re: [AMBER] Script for parallel runs

From: Gustavo Seabra (gustavo.seabra_at_gmail.com)
Date: Tue May 05 2009 - 11:31:38 CDT


> [supercomputer]$ mpirun -np 2 /share1/amber8/exe/sander -O -i polyAT_wat_md1.in -o [...]

      ^^^^^^^^^^

You seem to be using the serial version of sander. Try changing that
for sander.MPI.

Gustavo.

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