AMBER Archive (2009)

Subject: Re: [AMBER] Failures of tests

From: Per Jr. Greisen (pgreisen_at_gmail.com)
Date: Thu Apr 09 2009 - 07:52:32 CDT

Hi,

I have check the Sun Studio installation and it is up to date. I am
thinking more like compiler options where Sun's fortran compiler by
default is trapping but I am lost here....

On Thu, Apr 9, 2009 at 12:43 AM, Atro Tossavainen
<atro.tossavainen+amber_at_helsinki.fi> wrote:
> Per,
>
>> cd plane_plane_restraint && ./Run.dinuc_plpt
>> SANDER: Dinucleoside restrained with new plane-point angle
>>         restraint that was defined with new natural
>>         language restraint input.
>> Arithmetic Exception
>>   ./Run.dinuc_plpt:  Program error
>> *** Error code 1
>> make: Fatal error: Command failed for target `test.sander.BASIC'
>
> It just occurred to me that you ***might*** wish to check that the
> Sun Studio installation in the box you're using is patched and up to
> date in case what you're seeing reflects a compiler bug.  Just a
> wild guess.
>
> If it's Studio 11, Patch 120760 should be up to -21
> and Patch 121019 should be up to -10
> and Patch 121021 should be up to -07
> and Patch 122135 should be up to -03
>
> If it's Studio 12, Patch 124861 should be up to -13
> and Patch 127000 should be up to -07
> and Patch 127001 should be up to -03
> and Patch 124870 should be up to -03
>
> (The patchdiag.xref file is very helpful.)
>
> --
> Atro Tossavainen (Mr.)               / The Institute of Biotechnology at
> Systems Analyst, Techno-Amish &     / the University of Helsinki, Finland,
> +358-9-19158939  UNIX Dinosaur     / employs me, but my opinions are my own.
> < URL : http : / / www . helsinki . fi / %7E atossava / > NO FILE ATTACHMENTS
>
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