AMBER Archive (2009)

Subject: Re: [AMBER] AmberTools compilation error

From: Marius Retegan (marius.s.retegan_at_gmail.com)
Date: Wed Apr 01 2009 - 15:03:59 CDT

Hi,
I've compiled AmberTools a few hours ago using the same configure flags and
everything went fine.
The error message refers to the libguide that comes with MKL.
Did you modified the MKL_HOME variable?
Do a > echo $MKL_HOME to see what you get.
If that points to some directory, type this > unset MKL_HOME.
After redo the configure and make
Marius

2009/4/1 Kijeong Kwac <pine994_at_naver.com>

> Dear Amber users and experts:
>
> I have got an error message in installing ambertools after invoking
> "./configure_at gcc" and "make -f Makefile_at".
> The following is end part of the output:
>
> ar rv libsym.a symop.o matop.o tss.o
> ar: creating libsym.a
> a - symop.o
> a - matop.o
> a - tss.o
> ranlib libsym.a
> cp -p libsym.a /scratch/amber10/lib
> /scratch/amber10/bin/nab -c matextract.nab
> /scratch/amber10/bin/nab -o matextract matextract.o libsym.a
> /usr/bin/ld: cannot find -lguide
> collect2: ld returned 1 exit status
> cc failed!
> make[1]: *** [matextract] Error 1
> make[1]: Leaving directory `/scratch/amber10/src/nss'
> make: *** [install] Error 2
> Could you please help to solve this problem?
> Thanks.
>
> Sincerely,
> Kijeong Kwac.
>
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