AMBER Archive (2009)

Subject: [AMBER] run protein with structural Ca+

• Previous message: Therese Malliavin: "[AMBER] constant-pH: appearance of not titrated residues during the Monte Carlo simulation"
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Hello AMBER user
I want to run protein with structural Calcium, which binds to six amino
acids .
I search in Internet to find instruction for this job but I couldn't find
good instruction.
I don't know what changes must be do in PDB file and how prepare calcium
parameter file.
I am grateful for your every answer
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• Previous message: Therese Malliavin: "[AMBER] constant-pH: appearance of not titrated residues during the Monte Carlo simulation"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ]