AMBER Archive (2009)

Subject: [AMBER] assigning velocities to each atom without heating the system

From: Parimal Kar (pkar_at_mtu.edu)
Date: Mon Mar 02 2009 - 10:44:26 CST

Hi All,
  I am a novice to amber. I have created inpcrd and prmtop files loading the native structure into xleap. Now I want to perform MD. But I don't want to heat the system. How can I assign velocities to each atom without heating the system? Can we really do it in AMBER?
Thanks
Parimal

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