AMBER Archive (2009)

Subject: Re: [AMBER] contant force pulling simulation with amber 10

From: Gustavo Seabra (gustavo.seabra_at_gmail.com)
Date: Mon Feb 16 2009 - 12:11:40 CST

On Mon, Feb 16, 2009 at 12:01 PM, li hui <hui.alex.li_at_gmail.com> wrote:
> For constant velocity pulling simulation analogy to AFM
> pulling exeperiment, it can be done with steered MD by setting "Jar =1". But
> Anyone who knows how to constant force pulling simulation with amber 10?

Short answer: You can't. Our group is currently working on it, but it
is not yet available in Amber10, and may only be available in the next
version of Amber (11).

Gustavo.

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