AMBER Archive (2009)

Subject: RE: [AMBER] Compiling Carnal Amber7 in Amber9

From: Ross Walker (ross_at_rosswalker.co.uk)
Date: Wed Feb 11 2009 - 10:53:10 CST

Hi Viay,

I just did the following on our IA64 machine which works great using the following version of Intel ICC:

tg-login2 src/carnal> icc -V
Intel(R) C Itanium(R) Compiler for Itanium(R)-based applications
Version 9.0 Build 20060223 Package ID: l_cc_c_9.0.032
Copyright (C) 1985-2006 Intel Corporation. All rights reserved.
FOR NON-COMMERCIAL USE ONLY

I assume other versions will work as well.

tar xvf amber7.tar
cd amber7/src/carnal
icc -fast -o carnal *.c

This produces the executable 'carnal' in amber7/src/carnal/ which you can then move to a directory of your choice. I have no idea if it produces the correct answers, you'll have to test this yourself.

Good luck,
Ross

> -----Original Message-----
> From: amber-bounces_at_ambermd.org [mailto:amber-bounces_at_ambermd.org] On
> Behalf Of Vijay Manickam Achari
> Sent: Tuesday, February 10, 2009 11:58 PM
> To: AMBER Mailing List
> Subject: Re: [AMBER] Compiling Carnal Amber7 in Amber9
>
> Dear Bill,
>
> Specifically, I need to run CARNAL but we have not clue of how to modify
> the Makefile in order to install CARNAL in Amber9 which is running in HPC.
> Some hints will benefit us the most.
>
> Thanks
> Viay
>
> Vijay Manickam Achari
> (Phd Student c/o Prof Rauzah Hashim)
> Chemistry Department,
> University of Malaya,
> Malaysia
> vjramana_at_gmail.com
>
>
> --- On Fri, 6/2/09, Bill Ross <ross_at_cgl.ucsf.edu> wrote:
>
> > From: Bill Ross <ross_at_cgl.ucsf.edu>
> > Subject: Re: [AMBER] Compiling Carnal Amber7 in Amber9
> > To: amber_at_ambermd.org
> > Date: Friday, 6 February, 2009, 1:36 AM
> > Carnal is no longer supported, but it should be relatively
> > simple to modify the Makefile if it doesn't compile
> > as-is.
> >
> > Bill
> >
> > _______________________________________________
> > AMBER mailing list
> > AMBER_at_ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
>
>
>
>
>
> _______________________________________________
> AMBER mailing list
> AMBER_at_ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber

_______________________________________________
AMBER mailing list
AMBER_at_ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber