AMBER Archive (2009)

Subject: Re: [AMBER] Test run on Solaris 10 X 86

From: Manikandan Chandrasekaran (
Date: Fri Feb 06 2009 - 11:39:54 CST

   <br>Yes, I left some part of the output.<br><br>I am att aching the entire output log with this mail. <br><br>----- Ori ginal Message -----<br>From: Atro Tossavainen &lt;atro.tossa;<br>Date: Thursday, February 5, 2009 1:50 am<br>Subject: Re: [AMBER] Test run on Sol aris 10 X 86<br>To: AMBER Mailing List &lt;amber_at_ambermd.o rg&gt;<br><br>&gt; &gt; which cc<br>&gt; & gt; /usr/bin/cc<br>&gt; &gt; <br>&gt; &gt; cc -V<br>&gt; &gt; cc: Sun C 5.9 SunOS_i386 Patch 124868-= 01
   2007/07/12<br>&gt; &gt; usage: cc [ options] files. &nbsp; Use 'cc -flags' for details<br>&gt; <br>&gt ; That looks fine.<br>&gt; <br>&gt; &gt; &gt; &gt;&nbsp; cc: Warning: illegal option -fnostd<br>&gt= ;
   &gt; &gt; &gt;&nbsp; cc -c -fnostd -DSYSV -DBINTRAJ& nbsp;&nbsp; -o database.o database.c<br>&gt; <br>& gt; It's still only a warning and shouldn't hurt.<br>&gt; <br>&gt; The interesting bit is that the only references I can find to "fnostd"<br>&gt; anywhere are on the AMBER archive, and on the Sun HPTC mailing list<br>&gt; regarding AMBER, sur prisingly enough.&nbsp; Can the developers <br>&gt; please answer<br>&gt; the question of why this apparently invalid comp iler option is being<br>&gt; invoked and what is it supposed to do, anyway...?<br>&gt; <br>&gt; &gt; &gt ; &gt;&nbsp; cc: Warning: illegal option -fnostd<br>& gt; &gt; &gt; &gt;&nbsp; "database.c", line 43 5: warning: argument #4 is <br>&gt; &gt; &gt; inco mpatible with prototype:<br>&gt; &gt; &gt; &gt;& nbsp; &nbsp;&nbsp;&nbsp; ....... <br>& gt; &gt; &gt; &gt;&nbsp; "lex.dg_options.c", line 75: non-constant initializer: <br>&gt; &gt; &gt; op "NAME"<br>&gt; &gt; &gt; &gt;&nbsp; cc: acomp failed for embed.c<br>&gt; <br>&gt; I get the i mpression you've cut out parts of the log.&nbsp; If <br>&g t; this is<br>&gt; correct, please resend the entire output from the failed attempt,<br>&gt; without leaving anything out. <br>&gt; <br>&gt; -- <br>&gt; Atro Tossavainen < br>&gt;(Mr.)&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;& nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nb sp;&nbsp; / The Institute of Biotechnology at<br>&gt; Syst ems Analyst, Techno-Amish &amp;&nbsp;&nbsp;&nbsp;&nb sp; / the <br>&gt; University of Helsinki, Finland,<br> &gt; +358-9-19158939&nbsp; UNIX Dinosaur&nbsp;&nbsp;&n bsp;&nbsp; / <br>&gt; employs me, but my opinions are my own.<br>&gt; &lt; URL : http : / / www . helsinki . fi / %7E atossava / &gt; NO <br>&gt; FILE ATTACHMENTS<b r>&gt; <br>&gt; ______________ ________________________ _________<br>&gt; AMBER mailing list<br>& gt;<br>&gt; http://lists.ambermd.o rg/mailman/listinfo/amber

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