AMBER Archive (2009)

Subject: [AMBER] Atome Type

From: Mahmoud A. A. Ibrahim (m.ibrahim1982_at_yahoo.com)
Date: Thu Jan 29 2009 - 04:59:42 CST

Dear AMBER
According to Parm96-99, HO is defined as hydroxyl group, but in Frcmod.ff03 HO is defined as H aliph. bond. to C with 1 electrwd. group. So, how can AMBER differentiate between HO in ff03 and parm96.
I took forward to hearing from you.
Sincerely;
M. Ibrahim

      
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