AMBER Archive (2009)

Subject: Re: [AMBER] Duplicate residues

From: Bill Ross (ross_at_cgl.ucsf.edu)
Date: Mon Jan 19 2009 - 13:20:01 CST


> In cases where pdb files have duplicate residues Leap gives
> the following warning "Atom names in each residue should be
> unique. Same-name atoms are handled by using the first occurrence and by
> ignoring the rest".

This doesn't apply to 'duplicate residues', it applies to individual
residues. If you have multiple atoms with the same name in a residue,
it is likely that some have the wrong atom names.

Bill

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