AMBER Archive (2009)

Subject: [AMBER] amber9 in fedora10

From: Bala subramanian (bala.biophysics_at_gmail.com)
Date: Tue Jan 13 2009 - 11:51:49 CST

Hello all,

I am installing amber on a machine with fedora10. The configure.h was
created successfully. But make serial gives me the following error. Kindly
help me to solve it.

Starting installation of Amber9 (serial) at Tue Jan 13 18:40:29 CET 2009.
cd lib; make install
make[1]: Entering directory `/usr/local/amber9/src/lib'
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond new2oldparm.f >
_new2oldparm.f
gfortran -c -O0 -fno-second-underscore -o new2oldparm.o _new2oldparm.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond nxtsec.f >
_nxtsec.f
gfortran -c -O0 -fno-second-underscore -o nxtsec.o _nxtsec.f
gfortran -o new2oldparm new2oldparm.o nxtsec.o
mv new2oldparm ../../exe
/bin/rm _*.f
make[1]: Leaving directory `/usr/local/amber9/src/lib'
cd addles; make install
make[1]: Entering directory `/usr/local/amber9/src/addles'
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond lesmain.f >
_lesmain.f
gfortran -c -O0 -fno-second-underscore -o lesmain.o _lesmain.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond addspace.f >
_addspace.f
gfortran -c -O0 -fno-second-underscore -o addspace.o _addspace.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond readprm.f >
_readprm.f
gfortran -c -O0 -fno-second-underscore -o readprm.o _readprm.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond writprm.f >
_writprm.f
gfortran -c -O0 -fno-second-underscore -o writprm.o _writprm.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond readcrd.f >
_readcrd.f
gfortran -c -O0 -fno-second-underscore -o readcrd.o _readcrd.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond writcrd.f >
_writcrd.f
gfortran -c -O0 -fno-second-underscore -o writcrd.o _writcrd.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond pick.f >
_pick.f
gfortran -c -O0 -fno-second-underscore -o pick.o _pick.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond rline.f >
_rline.f
gfortran -c -O0 -fno-second-underscore -o rline.o _rline.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond nxt.f > _nxt.f
gfortran -c -O0 -fno-second-underscore -o nxt.o _nxt.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond intgr.f >
_intgr.f
gfortran -c -O0 -fno-second-underscore -o intgr.o _intgr.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond find.f >
_find.f
gfortran -c -O0 -fno-second-underscore -o find.o _find.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond of.f > _of.f
gfortran -c -O0 -fno-second-underscore -o of.o _of.f
_of.f:184.8:

     1 1x,'*** IF EXISTS MUST SPECIFY read OR wovr ',/)
       1
Warning: Extension: Tab character in format at (1)
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond geti.f >
_geti.f
gfortran -c -O0 -fno-second-underscore -o geti.o _geti.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond unit.f >
_unit.f
gfortran -c -O0 -fno-second-underscore -o unit.o _unit.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond getc.f >
_getc.f
gfortran -c -O0 -fno-second-underscore -o getc.o _getc.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond alert.f >
_alert.f
gfortran -c -O0 -fno-second-underscore -o alert.o _alert.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond echo.f >
_echo.f
gfortran -c -O0 -fno-second-underscore -o echo.o _echo.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond get4c.f >
_get4c.f
gfortran -c -O0 -fno-second-underscore -o get4c.o _get4c.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond getd.f >
_getd.f
gfortran -c -O0 -fno-second-underscore -o getd.o _getd.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond wlesprm.f >
_wlesprm.f
gfortran -c -O0 -fno-second-underscore -o wlesprm.o _wlesprm.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond lesprm.f >
_lesprm.f
gfortran -c -O0 -fno-second-underscore -o lesprm.o _lesprm.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond les2prm.f >
_les2prm.f
gfortran -c -O0 -fno-second-underscore -o les2prm.o _les2prm.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond checksz.f >
_checksz.f
gfortran -c -O0 -fno-second-underscore -o checksz.o _checksz.f
cd ../lib; ./Makelist ../lib/random.o ../lib/mexit.o ../lib/nxtsec.o
/bin/sh: ./Makelist: /bin/csh: bad interpreter: No such file or directory
make[1]: *** [libobj] Error 126
make[1]: Leaving directory `/usr/local/amber9/src/addles'
make: *** [serial] Error 2
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