AMBER Archive (2008)

Subject: AMBER: RMS plot

From: Beale, John (jbeale_at_stlcop.edu)
Date: Wed Dec 31 2008 - 13:11:39 CST

I need to make a plot of C-alpha RMS deviations (in Angstroms) vs. residue number for a protein that I am studying with MD. Is it possible to do this in ptraj? If so, how do I set it up?
 
John Beale
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