AMBER Archive (2008)

Subject: AMBER: mpirun Permission denied.

From: drugdesign (
Date: Thu Dec 25 2008 - 00:49:31 CST

Dear amber users,
I'm trying to run Amber8 on cluster through ssh. It runs fine on cluster server's but when I use mpi I get an error:
$ mpirun -np 2 -nolocal /data/soft/amber8/exe/sander -O -i -o polyAT_vac_md1_12Acut.out - c polyAT_gb_init_min.rst -p polyAT_vac.prmtop -r polyAT_gb_md1_12Acut.rst -x polyAT_gb_md1_12Acut.mdcrd
Permission denied.

Is it because of some wrong flags or I need to ask administrator to change permissions?

Best regards,
The AMBER Mail Reflector
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