AMBER Archive (2008)

Subject: AMBER: reg.building ions

From: balaji nagarajan (balaji_sethu_at_hotmail.com)
Date: Fri Dec 12 2008 - 04:40:07 CST

dear amber .,

There are some ions which are in built in amber
that can be viewed through
xleap
if we give
>check MG2
it will give details of the particular ion
is it possible to build
some other ions
of interest
by this
way
i have tried some organic molecule i find it
quite easy to create the topology and parameter for it
but wen i do for ions
it gives
error in -nc flag

is it possible to build ions
let me know
thanks in advance !

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