AMBER Archive (2008)

Subject: Re: AMBER: AdoMet parameterization with antechamber

From: Alan (
Date: Mon Nov 24 2008 - 04:46:52 CST

On Sun, Nov 23, 2008 at 21:13, David A. Case <>wrote:

> Antechamber needs as input a pdb file with all hydrogens added. sleap has
> an
> "hbuild" routine which should do this (I've not used it myself), and many
> other programs can also do this.

Like openbabel, yasara.

Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate
Department of Biochemistry, University of Cambridge.
80 Tennis Court Road, Cambridge CB2 1GA, UK.

----------------------------------------------------------------------- The AMBER Mail Reflector To post, send mail to To unsubscribe, send "unsubscribe amber" (in the *body* of the email) to