AMBER Archive (2008)

Subject: AMBER: Query on restart file

From: Neha Gandhi (
Date: Thu Oct 30 2008 - 20:49:30 CDT

Hi Amber community,

I ran 17 ns of production runs (each trajectory file consist of 500 ps with
50 frames). I tried to run another 500 ps after 17ns but it just says cannot
read coordinates from the previous .rst file. When I checked , there is no
spelling error and I checked the previous rst files. To verify I again run
the 16th ns md again and no issues with it. Only thing I cannot further run
MD after 17th ns? What could be the problem and the possible solution? I m
following the mm-pbsa tutorial in amber.

Many thanks,

Neha Gandhi,
School of Biomedical Sciences,
Curtin University of Technology,
GPO Box U1987 Perth,
Western Australia 6845

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