AMBER Archive (2008)

Subject: AMBER: 2'-5'-branched RNA

From: Volodymyr Zloy (
Date: Mon Oct 27 2008 - 11:10:00 CDT

Dear Amber Community,

I want to simulate 2'-5'-branched RNA. How can I prepare in easy way the prmtop and inpcrd files?
Any help will be much appreciated.




Dr. Volodymyr Nechyporuk-Zloy
University of Aarhus
Interdisciplinary Nanoscience Center (iNANO)
Ny Munkegade, Building 1521,
DK-8000, Aarhus C, Denmark
Phone: (+45 )8942 5535 Fax: (+45 )8942 3690


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