AMBER Archive (2008)

Subject: Re: AMBER: amber10 installation on sgi_mips

From: Rima Chaudhuri (rima.chaudhuri_at_gmail.com)
Date: Thu Oct 02 2008 - 11:42:25 CDT

Atro:
I would really appreciate if you could help me debug this..as of now
installing the serial version (./configure_amber -nobintraj -verbose
-static sgi_mips) returns :

Starting installation of Amber10 (serial) at Thu Oct 2 10:53:44 CDT 2008.
        cd lib && make install
        /lib/cpp -P -DSGI -DnoVDINVSQRT new2oldparm.f > _new2oldparm.f
        f90 -c -n32 -mips4 -r14000 -O0
-LIST:notes=ON:software_names=ON
-LIST:all_options=ON:cite=ON:symbols=ON -o new2oldparm.o
_new2oldparm.f
/usr/lib32/cmplrs/be translates /tmp/ctmB.BAAa02x0f into
_new2oldparm-after-lno.f and _new2oldparm.loc, based on source
_new2oldparm.f
/usr/lib32/cmplrs/be: FATAL ERROR: Error in buffer access: Too many
pragmas in sequence in WN2F_pragma()
f90 INTERNAL ERROR: /usr/lib32/cmplrs/be returned non-zero status 1
*** Error code 1 (bu21)
*** Error code 1 (bu21)

running the parallel version: (./configure_amber -nobintraj -verbose
-mpi sgi_mips) --the config_amber.h file is written successfully.
 Upon make parallel, it returns:
### Compiler Error in file _qm2_dftb_module.f during Codegen Emit phase:
### Out of memory in MEM_POOL_Alloc
f90 INTERNAL ERROR: /usr/lib32/cmplrs/be returned non-zero status 1

this is in-spite of me changing the vmemory to unlimited (ulimit -m
unlimited , ulimit -n unlimited).

thanks

On Thu, Oct 2, 2008 at 4:59 AM, Atro Tossavainen
<atro.tossavainen+amber_at_helsinki.fi> wrote:
>> The (few?) remaining sgi_mips Amber people can chime in,
>
> I wouldn't mind helping to debug this... but we haven't had anybody
> interested in purchasing AMBER 10 yet.
>
> --
> Atro Tossavainen (Mr.) / The Institute of Biotechnology at
> Systems Analyst, Techno-Amish & / the University of Helsinki, Finland,
> +358-9-19158939 UNIX Dinosaur / employs me, but my opinions are my own.
> < URL : http : / / www . helsinki . fi / %7E atossava / > NO FILE ATTACHMENTS
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-- 
-Rima
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