AMBER Archive (2008)

Subject: Re: AMBER: Location of vdw radii and partial charges for ff99SB

From: Carlos Simmerling (carlos.simmerling_at_gmail.com)
Date: Mon Sep 29 2008 - 09:58:45 CDT

these use the same vdw and charges for ff94, so look in
dat/leap/prep/all_amino94* and dat/leap/parm/parm94.dat

On Mon, Sep 29, 2008 at 9:08 AM, Charles Letner, Ph.D.
<chuck_at_theletners.com> wrote:
>
> Hello,
> Is there a file (or two) that lists the vdw radii and partial charges for
> each amino acid atom type for the ff99SB. I am looking for both charged and
> uncharged amino acids and n/co-terminal parameters. I am looking for a file
> (or two) that is easy to "read".
>
> Cheers,
> Chuck
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
      to majordomo_at_scripps.edu