AMBER Archive (2008)

Subject: Re: AMBER: Problem In Paralklel Amber

From: Carlos Simmerling (carlos.simmerling_at_gmail.com)
Date: Fri Sep 26 2008 - 06:52:00 CDT

please tell us exactly what you are doing- what is your job script,
machinefile, which sander version, how you set your configure script,
etc.
there is simply no way to help with the minimal information you have given.

On Fri, Sep 26, 2008 at 7:10 AM, Ranga Swamy <balimidiswamy_at_yahoo.co.in> wrote:
> Hi,
>
> I am running amber using Lam-MPI.
> I've created hostfile with four entries. And trying with -np 4. It is a linux cluster built with Oscar suit. But job is running only on one where the job submitted and only with one process. It is is not spawning the processes onto other nodes.
>
> Please help me if anybody knows the solution
>
> Thanks & Regards
> ----------------------------------------
> B.Ranga Swamy,
> Project Engineer,
> C-DAC, Pune.
> Mobile : 09881133489
> Land Office : 020-25694121
> Office Mail Id : rangab_at_cdac.in
> Personal Mail Id : balimidiswamy_at_yahoo.co.in
>
>
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