AMBER Archive (2008)

Subject: Re: AMBER: compilation problem

From: David A. Case (case_at_biomaps.rutgers.edu)
Date: Fri Sep 12 2008 - 07:04:59 CDT

On Fri, Sep 12, 2008, john smith wrote:

> # make -f Makefile_at
> make: Fatal error in reader: Makefile_at, line 34: Unexpected end of line
> seen
>
> The part of the make file containing line 34 is
> # miscellaneous:
> (cd reduce && make install )
> # (cd paramfit && make install )
>
> # leap and gleap:
> (cd leap && make install )
> (cd gleap && make sleap )

It possible(?) that solaris "make" doesn't allow comment lines inside a
target. You might try removing them to see what happens.

>
> I have gcc 3.4.3, but no g77, whether amber tools can be compiled with Sun
> Fortran compilers?

If you have gcc, that's the most likely to work. You might also see if
you have (or can get) GNU make (sometimes called gmake) and use that
instead of Sun's make. AmberTools *should* compile with solaris
compilers, but this has not been nearly so widely tested as the GNU
compilers, and might depend upon version number (for both Amber and cc), etc.

...regards...dac
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