AMBER Archive (2008)

Subject: Re: AMBER: solvent interaction in active site

From: S.Sundar Raman (sundar02_at_gmail.com)
Date: Mon Sep 01 2008 - 09:28:10 CDT

Density calculation using solvent command will help you to find the number
of water molecules which are close to the particular ative site residue or
atom.
Solvent interaction analysis had been reviewed out by Mr. Biman
Bagchi, Chemical
Reviews, 2005, Vol. 105, No. 9, 3197-3129.
I hope it will help you to study the solvent and active site interaction. 

-- 
S.Sundar Raman
CSIR-SRF
Chemical Laboratory
Central Leather Research Institute
Adyar, Chennai, India- 600 020
&
DAAD Research Scholar
Hause No. 5, Room No. 106
Ulmenweg 55, Mannheim, Germany - 68167

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