AMBER Archive (2008)

Subject: AMBER: interaction energies

From: Arturas Ziemys (
Date: Thu Aug 14 2008 - 10:21:34 CDT


I can not find approach in Amber to calculate non-bonded interactions
for a chosen pair of atom groups. Any search leads just to MM-PBSA...
Could anyone give some idea ?



Arturas Ziemys, PhD School of Health Information Sciences University of Texas Health Science Center at Houston 7000 Fannin, Suit 880 Houston, TX 77030 Phone: (713) 500-3975 Fax: (713) 500-3929

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