AMBER Archive (2008)

Subject: Re: AMBER: Need help with force field parameters for Lipopolysaccharide (LPS)

From: Wenyong Tong (wenyong_tong_at_yahoo.com)
Date: Tue Aug 05 2008 - 09:51:31 CDT

Hello,

For sugar part, you can use glycam04 or 06. For lipid tail,you can use gaff.

Wenyong

----- Original Message ----
From: dipti lele <diptisl86_at_gmail.com>
To: amber_at_scripps.edu
Sent: Tuesday, August 5, 2008 6:03:10 AM
Subject: AMBER: Need help with force field parameters for Lipopolysaccharide (LPS)

Hi everyone!
I'm trying to run a few simulations with LPS but am unable to find a force field for the molecule. Can anybody please help me with this ? 

-- 

      
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