AMBER Archive (2008)Subject: AMBER: divcon.rst ??
From: IN SUK JOUNG (i.joung_at_gmail.com)
Date: Mon Aug 04 2008 - 19:06:43 CDT
I tried to calculate NMR chemical shift using divcon. However, it doesn't
seem to dump restart file. According to the manual, once DUMP=n is set,
divcon should write restart file(divcon.rst) periodically.
Here is my input file,
sander input
----
&cntrl
imin = 1, maxcyc = 5, drms = 5d-3,
scee = 1.2, ntpr = 1, ntb = 0, cut = 9,
ifqnt = 1, ncyc = 1,
&end
&qmmm
qmmask = ':1-29',
qm_theory = 'MNDO',
qmcharge = -19,
idc = 1,
&end
divcon.in
----
CARTESIAN MNDO CHARGE=-19 GEOM=PDB DIRECT &
STANDARD NMR DPSCF=1.0d-9 DUMP=1 &
WRTPDB PDUMP=1 MAXIT=100 PRTDPSTAT &
RESTART
END_COORD
divcon wrote divcon.dmx every iteration but it never wrote divcon.rst.
Please let me know if my input has a problem. Can I restart divcon
calculation with only divcon.dmx without divcon.rst?
--
Best,
In-Suk Joung
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