AMBER Archive (2008)Subject: AMBER: Amber tools 1.2 test failure (installation)
From: Myunggi Yi (myunggi_at_gmail.com)
Date: Mon Jul 21 2008 - 17:17:05 CDT
Dear Amber users,
When I run the test of amber tools 1.2, I've got the following error.
=========================
cd ptraj_matrix && ./Run.matrix
ptraj: analyze fluctuation matrices
Segmentation fault
./Run.matrix: Program error
make: *** [test.ptraj] Error 1
=========================
The following is the output of ptraj
++++++++++++++++++++++++++
ANALYZE
1> ANALYZE MATRIX: Analyzing matrix 1rrb_vac_mwcovarmat and dumping
results to 1rrb_vac_mwcovarmat_evecs.dat
Calculating 5 eigenvectors and thermodynamic data
2> ANALYZE MATRIX: Analyzing matrix 1rrb_vac_distcovarmat and dumping
results to 1rrb_vac_distcovarmat_evecs.dat
Calculating 5 eigenvectors and no thermodynamic data
Eigenvectors will be reduced
Processing AMBER trajectory file 1rrb_vac.mdcrd
Set 1 ..........
++++++++++++++++++++++++++
All others are passed.
Can anyone help me?
--
Best wishes,
Myunggi Yi
==================================
KLB 419
Institute of Molecular Biophysics
Florida State University
Tallahassee, FL 32306
Office: (850) 645-1334
http://www.scs.fsu.edu/~myunggi
myunggi_at_gmail.com
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