AMBER Archive (2008)

Subject: Re: AMBER: Trans proline

From: Barbault Florent (
Date: Sun Jul 20 2008 - 01:27:37 CDT


As far as I know, there is no difference in the proline parameters for
the cis or trans conformation.

Florent Barbault

On Sun, 20 Jul 2008 14:53:00 +0900
  "dipti lele" <> wrote:
> Hello .
> I have to make a peptide with trans proline into it. How should I
> about it using tleap? Are there any parameter files for trans
> available? By default tlarp added cis proline only. But NMR data of
> peptide says that the proline is in trans. I am kind of new to the
> Please guide me to resolve the problem...
> Thanking you,...
> Regards
> Deepti Lele
> --

The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)