AMBER Archive (2008)

Subject: AMBER: Dihedral Angle Parameters

From: Ilyas Yildirim (yildirim_at_pas.rochester.edu)
Date: Thu Jun 26 2008 - 16:07:16 CDT

Dear AMBER users,

I realized that the amber dihedral parameters are symmetric; the torsional
energy vs angle has a symmetric character. Is it reasonable to create
dihedral parameters for a particular dihedral angle such that it will have
an asymmetric torsional energy function in amber force field? Thanks in
advance.

Best, 

-- 
  Ilyas Yildirim
  ---------------------------------------------------------------
  = Department of Physics        -                              =
  = University of Rochester      -                              =
  = 585-275-6766 (office)        - 585-267-5644 (home)          =
  = http://www.pas.rochester.edu/~yildirim/                     =
  ---------------------------------------------------------------

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