AMBER Archive (2008)

Subject: Re: AMBER: PROBLEM: AmberTools Installation using Ubuntu

From: David A. Case (case_at_scripps.edu)
Date: Sat Jun 14 2008 - 14:09:02 CDT

On Sat, Jun 14, 2008, Mark Williamson wrote:

> >
> > ==============================================================
> > cd antechamber/c60 && ./Run.c60
> > *** stack smashing detected ***: ../../../exe/antechamber terminated
> > ======= Backtrace: =========
> > /lib/tls/i686/cmov/libc.so.6(__fortify_fail+0x48)[0x40142138]
> > /lib/tls/i686/cmov/libc.so.6(__fortify_fail+0x0)[0x401420f0]
> > ../../../exe/antechamber[0x806faf6]
>
>
> In the rjcrt() function, ($AMBERHOME/src/antechamber/jcrt.c), the array
> defined at
>
> char tmpchar[10];
>
> is too small to hold the line "basis=6-31G*"

Thanks! I've put the fixes into CVS, and this will show up in the next
release of AmberTools, which is due quite soon now.

...dave

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