AMBER Archive (2008)

Subject: Re: AMBER: Compile amber10 parallel with suppied LAM

From: Gustavo Seabra (
Date: Thu Jun 12 2008 - 12:39:34 CDT

Did you do 'lamboot' before trying to run sander?

You probably need to include the 'lamboot' command before the call to
sander. If you are using a script, you could also include 'lamhalt'
after the execution to stop lamd.


On Thu, Jun 12, 2008 at 1:32 PM, James W. Caldwell <> wrote:
> oops, I meant "lamd NOT running". Do I need to
> set additional environment variables?
> thanks,
> jim
> -----Original Message-----
> From: []On Behalf
> Of James W. Caldwell
> Sent: Thursday, June 12, 2008 9:31 AM
> To:
> Subject: AMBER: Compile amber10 parallel with suppied LAM
> Hi,
> I can compile/link Sander with the supplied
> LAM code but when I ask it to execute I get
> a system message about "lamd" running. What's
> this about?
> thanks,
> jim
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