AMBER Archive (2008)

Subject: RE: AMBER: problem of install amber9

From: Xioling Chuang (xioling_c_at_hotmail.com)
Date: Thu Jun 05 2008 - 04:09:27 CDT

Dear All,
I have successed installation amber9 as a serial. Please ignore my previous message.
Regards,
Xioling

From: xioling_c_at_hotmail.comTo: amber_at_scripps.eduSubject: AMBER: problem of install amber9Date: Thu, 5 Jun 2008 10:37:27 +0200

Dear All,My machine is Linux cluster of Intel xeon (i686) processor, SuSE server 9, ifort (intel 9.0) compiler.I have installed amber9 without any problem and used it for a year. However, after I patch a bugfix.all (bugfix.1-43) and re-compiled, I got the error below. Please help me to solve this.(config.h was generated as "./configure ifort_ia32") Regards,Xioling=================================...o qm2_dftb_short_range.o qm2_dftb_skpar.o qm2_dftb_slkode.o qm2_dftb_slktrafo.o \ qm_div.o force.o \ ../lmod/lmod.a ../dcqtp/src/qmmm/libdivcon.a \ ../lapack/lapack.a ../blas/blas.a \ ../lib/nxtsec.o ../lib/sys.aIPO Error: unresolved : machar Referenced in lmod.a(liblmod.o)IPO Error: unresolved : dmout_ Referenced in lmod.a(arpkdrv.o)IPO Error: unresolved : dsaupd_ Referenced in lmod.a(arpkdrv.o)IPO Error: unresolved : dseupd_ Referenced in lmod.a(arpkdrv.o)../lmod/lmod.a(libxmin.o)(.text+0x2eb): In function `xmin_':: undefined reference to `machar'../lmod/lmod.a(liblmod.o)(.text+0x4950): In function `lmod_':: undefined reference to `machar'../lmod/lmod.a(arpkdrv.o)(.text+0x1a3): In function `dsarpack_.J':: undefined reference to `dmout_'../lmod/lmod.a(arpkdrv.o)(.text+0xa53): In function `dsarpack_.J':: undefined reference to `dsaupd_'../lmod/lmod.a(arpkdrv.o)(.text+0xfa9): In function `dsarpack_.J':: undefined reference to `dseupd_'../lmod/lmod.a(arpkdrv.o)(.text+0x17ed): In function `dsarpack_.A':: undefined reference to `dmout_'../lmod/lmod.a(arpkdrv.o)(.text+0x1ed4): In function `dsarpack_.A':: undefined reference to `dsaupd_'../lmod/lmod.a(arpkdrv.o)(.text+0x2504): In function `dsarpack_.A':: undefined reference to `dseupd_'make[1]: *** [sander] Error 1make[1]: Leaving directory `/softwares/amber9/src/sander'make: *** [serial] Error 2

Discover the new Windows Vista Learn more!
_________________________________________________________________
Discover the new Windows Vista
http://search.msn.com/results.aspx?q=windows+vista&mkt=en-US&form=QBRE
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
      to majordomo_at_scripps.edu