AMBER Archive (2008)

Subject: Re: AMBER: VMD Movie

From: Carlos Simmerling (carlos.simmerling_at_gmail.com)
Date: Wed May 28 2008 - 19:10:03 CDT

Pat,
does VMD tell you how many frames it loaded? (look in the main
window). I want to know if the problem is with the # frames in the
mdcrd or if it is in the movie generation.
carlos

On Wed, May 28, 2008 at 7:33 PM, Campbell, Patrick <pcampbell_at_msm.edu> wrote:
> Hello All,
>
> I have loaded my .mdcrd file into my .prmtop file as per the instructions
> for visualizing movies using VMD. The simulation which was used to generate
> the .mdcrd and .prmtop files lasted 10 ns, yet, only 12 frames are generated
> in VMD.
>
> I would like to get a longer movie (greater number of frames). What am I
> doing wrong?
>
> Pat.
>
> ps - I have reviewed tutorial nine from Dr. Ross Walker as a basis for my
> work thus far.
> 

-- 
===================================================================
Carlos L. Simmerling, Ph.D.
Associate Professor Phone: (631) 632-1336
Center for Structural Biology Fax: (631) 632-1555
CMM Bldg, Room G80
Stony Brook University E-mail: carlos.simmerling_at_gmail.com
Stony Brook, NY 11794-5115 Web: http://comp.chem.sunysb.edu
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