AMBER Archive (2008)

Subject: Re: AMBER: rms

From: Vlad Cojocaru (Vlad.Cojocaru_at_eml-r.villa-bosch.de)
Date: Mon May 12 2008 - 07:40:46 CDT


Hi Urszula

Could you tell us the script you are using to do that? My impression is
that your mask is not correct.

Best
vlad

Urszula Uciechowska wrote:
> Dear Amber users,
>
> I am trying to calculate rms with ptraj, but after loading my trajectory files i keep
> having
>
> ERROR in rms: KRMS_ reported Number of atoms less than 2
>
> and the program quits. What is wrong?
> thanks a lot for any help
>
> Best Regards,
> Urszula Uciechowska
>
> MSc.PhD Student
> Medicinal Chemistry Group
> University of Halle-Wittenberg
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-- 
----------------------------------------------------------------------------
Dr. Vlad Cojocaru

EML Research gGmbH Schloss-Wolfsbrunnenweg 33 69118 Heidelberg

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e-mail:Vlad.Cojocaru[at]eml-r.villa-bosch.de

http://projects.villa-bosch.de/mcm/people/cojocaru/

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