AMBER Archive (2008)

Subject: AMBER: Jarzinsky relationship

From: E.M. (pckboy_at_gmail.com)
Date: Sun May 04 2008 - 21:39:51 CDT


Hello,

I am doing some pulling experiments using Jarzinsky's relationship,
the output file using AMBER9 is something like

x xo whatever work

My question is, do I have to substract the biasing potential after I get
the output
or that is taking care of by the program?. I just want to make sure I
understand
what is going on here.

Regards

E.M.
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu