AMBER Archive (2008)

Subject: AMBER: segmentation fault in SANDER

From: Anamika Awasthi (aawasthi28_at_gmail.com)
Date: Tue Apr 29 2008 - 06:44:29 CDT

Dear Friends,
   Thanks for your guidance.
   I created min,in file and gave this--
initial minimization with Cartesian restraints for the solute
&cntrl
imin=1, maxcyc=200,
ntpr=5,
ntr=1,
restraint_wt=500.0,
restraintmask=':1-1944',
/
my protein is hexamer and wants to fix whole protein as I wants to do energy
minimization for solvant only.
 but sander is not running properly and showing segmentation fault..why this
is so?

 Thanks in advance 

-- 
Anamika Awasthi

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