AMBER Archive (2008)

Subject: Re: AMBER: nmode output

From: Lachele Foley (Lists) (lf.list_at_gmail.com)
Date: Fri Apr 25 2008 - 09:09:37 CDT

I don't know for certain, but this:

forrtl: severe (24): end-of-file during read, unit 5, file

Suggests that there was some issue with one of your input files. In
particular,

/home/jacoposg/entropy/sanmin_rec.1.restrt, line 76, position 2

...so, see position 2 of line 76 of that file. I bet there's some
inappropriate character there. If not there, then look before that.
This might just be the position where the program gave up trying to
make sense of the file.

:-) Lachele

On Fri, Apr 25, 2008 at 4:36 AM, <jacopo.sgrignani_at_unifi.it> wrote:
> Dear amber users
> I compiled and tested nmode and everything is right, but when i try to
> perform a calculation on a protein ligand complex (7500 atoms) I obtain
> this error :
>
>
> forrtl: severe (24): end-of-file during read, unit 5, file
> /home/jacoposg/entropy/sanmin_rec.1.restrt, line 76, position 2
> Image PC Routine Line
> Source
> nmode 00000000005042CE Unknown Unknown
> Unknown
> nmode 00000000005034CE Unknown Unknown
> Unknown
> nmode 00000000004C3F76 Unknown Unknown
> Unknown
> nmode 0000000000481179 Unknown Unknown
> Unknown
> nmode 0000000000480A67 Unknown Unknown
> Unknown
> nmode 000000000049B52C Unknown Unknown
> Unknown
> nmode 000000000042643E Unknown Unknown
> Unknown
> nmode 0000000000403491 Unknown Unknown
> Unknown
> nmode 0000000000403322 Unknown Unknown
> Unknown
> libc.so.6 00002B74707EC4CA Unknown Unknown
> Unknown
> nmode 000000000040326A Unknown Unknown
> Unknown
>
> Does anybody know the meaning of this error?
> Thanks
>
> Jacopo
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-- 
:-) Lachele
Lachele Foley
CCRC/UGA
2-0263
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